CDS

Accession Number TCMCG080C34283
gbkey CDS
Protein Id XP_027903346.1
Location complement(join(42541811..42541897,42542377..42542445,42542538..42542604,42542898..42542965,42543322..42543432,42543552..42543609,42543754..42543790,42544062..42544155,42544315..42544380,42544462..42544526,42544654..42544798,42544902..42544967,42545380..42545529,42545806..42545875,42546512..42546588,42546673..42546741,42546862..42546945,42547286..42547329,42547525..42547659,42547764..42547962,42548748..42548876,42549032..42549115,42549266..42549379,42549749..42549856,42549940..42550035,42550674..42550742,42550852..42550953,42551025..42551120,42551768..42551851,42552489..42552606,42552675..42552751,42552887..42553081,42553206..42553453,42554412..42554562,42554783..42554899,42555084..42555191,42555427..42555526,42555735..42555814,42556255..42556299))
Gene LOC114163314
GeneID 114163314
Organism Vigna unguiculata

Protein

Length 1293aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA521068
db_source XM_028047545.1
Definition NPC intracellular cholesterol transporter 1 isoform X1 [Vigna unguiculata]

EGGNOG-MAPPER Annotation

COG_category I
Description Niemann-Pick C1
KEGG_TC 2.A.6.6
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K12385        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04979        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04979        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005496        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006869        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008202        [VIEW IN EMBL-EBI]
GO:0008206        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010876        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015485        [VIEW IN EMBL-EBI]
GO:0015850        [VIEW IN EMBL-EBI]
GO:0015918        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030301        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032934        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042632        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043178        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055088        [VIEW IN EMBL-EBI]
GO:0055092        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACCTTCGCCGAGGATTCTTCACCTTATTAGTTCTGTTACAGTTCGTTTCAATTTCATCTTCGGTTGAAGCCGACAACTTGTCCACAAGACTTCTTTTGACCTCCAATGCCAACACAGCGGGGGAAAAGCATTCCCAGGATTACTGTGCAATGTATGACATTTGTGGAACACGCAGTGACGGTAAAGTAGTGAATTGTCCATTTGGTTCCCCGGCTGTTAAGCCAGATGATTTGTTCTCATCGAAGATCCAAAGTTTGTGTCCAACTATTACGGGGAACGTTTGTTGTACAGAAGCTCAGTTTGACACATTAAAGACACAGGTCCAACAGGCCATTCCTTTTCTTGTAGGTTGTCCAGCATGCTTAAGAAACTTTTTGAATCTGTTTTGTGAGCTTACGTGTTCTCCGAACCAGAGTTTATTCATCAATGTGACCTCAGTTGACAATGTTGATGGTAATTTGACAGTGGGTGGGATTGATTATTTAATAGCTGATGCTTATGGTGAAGGGTTATATGAATCATGCAAAGAGGTAAAGTTTGGCACTATGAATTCTCGAGCTCTACAGTTCATTGGTGCTGGTGCTCAGAATTTTAAAGATTGGTTTGCTTTTATTGGTAGAAAAGCAGCCCCTCATGGTCTTGGTTCACCATATGCAATTACATTCAGGTCAAATGCAATTGAGTCATCTGGCATGAAACCTATGAATGTTTCAACTTATTCGTGTGGAGATATTTCTCTTGGCTGTTCTTGTGGTGACTGCCCTTCATCTTCAGTATGCTCCGTTTCATCTTCAACTACCACCAGTAAGAAGGATTCATGCTCCGTGAAAGTTGGGACTTTAGTGGTGAAATGTGTTGACTTTATTTTGGCAGTCTTGTACATTATACTGATTTGTGTGTTCTTGGGTTGGGGACTGTATCATCGGATAAGAGAAAGGAAACCTACATACAGAACTAAATCAGTGTCTAATGTCATTAGTGACGGTGCACTGTATACTCGTAACAGGGAGAAGGATGAGAACCTCCCAATGCAGATTCATATGATGGAAGATGCCCGAGAAAACAGAAATGAAGTCCGGCTCTCTGCAGTGCAGGGATATATGTCAAATTTTTACAGGAAATATGGATCGTATGTAGCTAGACATCCGATTGTGATGTTGGCTTCATCTGTCGCTATTATTCTTCTCCTCTGTGTTGGTCTAATTCAGTTCAAGGTTGAGACACGACCTGAGAAGCTCTGGGTAGGACCTGGAAGCAAAGCAGCGCAAGAGAAGCAGTTTTTTGACAGTCATCTTGCTCCATTTTACCGAATTGAACAGCTCATACTGGCAACAATTCCAGATCACGTAAATAGTACATCACCAAGAATTGTGTCAGATGACAACATTAAATTTTTGTTTGAAATACAGAAAAAGGTTGATGCTATTCGTGCTAATTATTCTGGCTCGATGGTATCTCTGCAAGACATATGTATGAAGCCACTAGACAAAGATTGTGCTACTCAAAGTGTCCTGCAGTACTTCAAAATGGATCCCAAAAATTTAGACAATTACGGGGGAGTTGACCATCTCAATTACTGTTTCGAGCATTATTCCTCAGCAGACCTATGTATGAGTGCATTTAAAGCTCCTCTTGATCCAAGCACTGTATTAGGAGGATTCTCTGGAAATGATTATTCAGGGGCATCTGCATTCGTTGTAACGTATCCAGTAAATAATGCCGTTGATAAAGAAGGTAATGGAACAAGAAAGGCAATTGCTTGGGAGAAGACCTTTATTCAGCTGGTGAAGGATGAACTGTTACCAATGGTACAATCAAGAAATTTGACTCTAGCTTTTTCATCTGAAAGCTCTGTTGAAGAAGAGTTGAAAAGAGAAAGTACTGCAGACGCTATTACTATATTGGTTAGCTATCTTGTGATGTTTGCTTATATATCTCTTACTCTAGGGGATACACTGCATCCTTCATTTTTCTATATTTCTTCAAAGGTGCTACTTGGTCTTTCTGGAGTCATTCTTGTTATGTTGTCTGTCCTTGGGTCGGTTGGATTTTTTAGTGTCCTTGGTGTAAAATCTACTCTGATCATCATGGAAGTTATCCCTTTTCTTGTCCTAGCTGTTGGGGTTGATAATATGTGTATACTAGTTCATGCTGTAAAAAGACAACGACTGGAGTTGCCCTTAGATGAACGAATAAGCAATGCACTTGTGGAAGTTGGACCATCAATAACACTGGCCAGTGTTTCGGAGGTTTTAGCATTTGCAGTTGGTAGTTTTATTTCCATGCCTGCAATCCGTGTGTTTTCCATGTTTGCTGCATTGGCTGTTCTTTTGGACTTTCTCCTGCAAGTTACTGCTTTTGTTGCTTTGATAGTTCTTGACTCTCTGCGGGCAGAAGATAAAAGGGTTGACTGTTTTCCATGCATAAAAGTACATTCGGACCCTGATATAGGCATTGGACAAAGAAAACCTGGCTTATTGGCTCGATATATGAAGGAGGTTCATGCTCCCATTCTGAGTATATGGGGTGTAAAAATAGTTGTCATAGCAGTTTTTGTGGGATTTACATTTGCTAGCATTGCATTGAGCACTAGAGTTGAACCTGGTTTAGAGCAAGAGATTGTTCTTCCTCGAGATTCATATCTTCAGGGTTATTTCAGTAATGTTTCAGAATATCTCAGAATTGGACCTCCTTTGTATTTTGTTGTGAAAAACTATAACTACAGCTCAGAATCACCACAAACAAATCAGCTTTGCTCCATTAGCCGATGCAATTCAGACTCTCTTTTAAATGAGATTGCTAAAGTGGCCCTAGTACCAGACACAAGTTATATTGCCAAGCCAGCTGCCTCATGGCTGGATGATTTTCTAGTGTGGGTATCTCCAGAAGCATTTGGGTGCTGCAGGAAGTTTACAAATGGGAGTTATTGCCCTCCTGATGATCAGCCTCCTTGCTGTGCTCCTGGGGACAACTCCTGTGTTTCAGTTGGAACATGTAAAGATTGCACAACGTGTTTCCGTCACTCAGATCTCCAGAATGATCGTCCATCTACAACCCAATTTAGGGAGAAACTGCCATGGTTCCTTAGTTCTCTGCCATCTGCTGATTGTGCAAAAGGTGGTCACGGAGCATACACCAGCAGTGTTGAACTGACAGGCTACAACAATAGCATTATTCCCGCCTCATCATTTCGTACATATCATACCCCGCTTAACAAGCAGATTGACTACGTTAATTCTATGAGGGCTGCTCGAGAATTCAGTTCAAGAGTTTCTGAATCTTTAAAGATTGAGATCTTTCCATATTCAGTGTTTTATATGTTTTTTGAGCAATACCTTCATATATGGAAGACTGCACTGGTCAACCTTGCTATAGCTATTGGTGCGGTTTTTATCGTTTGTTTGGTTATCACGGGCAGTTTATGGAGTTCATCAATAATTTTGTTGGTCTTGGCAATGGTTGTTGTTGATCTTATGGGAGTGATGACCATTCTGAATATCCAGTTGAATGCTCTCTCGGTGGTCAACCTTGTTATGTCAGTGGGCATTGCGGTTGAGTTTTGTGTGCATATGACTCATTCTTTCACTGTAGCAAGTGGAGACAGAGATCAACGTGCTAAGGAAGCTTTGAGTACAATGGGCGCTTCAGTGTTCAGTGGCATTACACTAACAAAGCTGGTTGGAGTTATTGTTCTTTGCTTCTCAAGAACAGAAGTATTTGTGATTTATTACTTTCGGATGTACTTGTCGTTAGTGCTTCTTGGTTTCTTGCACGGACTTGTCTTTTTGCCGGTGGTATTAAGCATATTTGGTCCACCTTCAAGATGTTCAATTACTGAGCAAGGGGAAATTCGTTCATCAACATCTTCACGACAGTAA
Protein:  
MDLRRGFFTLLVLLQFVSISSSVEADNLSTRLLLTSNANTAGEKHSQDYCAMYDICGTRSDGKVVNCPFGSPAVKPDDLFSSKIQSLCPTITGNVCCTEAQFDTLKTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVDNVDGNLTVGGIDYLIADAYGEGLYESCKEVKFGTMNSRALQFIGAGAQNFKDWFAFIGRKAAPHGLGSPYAITFRSNAIESSGMKPMNVSTYSCGDISLGCSCGDCPSSSVCSVSSSTTTSKKDSCSVKVGTLVVKCVDFILAVLYIILICVFLGWGLYHRIRERKPTYRTKSVSNVISDGALYTRNREKDENLPMQIHMMEDARENRNEVRLSAVQGYMSNFYRKYGSYVARHPIVMLASSVAIILLLCVGLIQFKVETRPEKLWVGPGSKAAQEKQFFDSHLAPFYRIEQLILATIPDHVNSTSPRIVSDDNIKFLFEIQKKVDAIRANYSGSMVSLQDICMKPLDKDCATQSVLQYFKMDPKNLDNYGGVDHLNYCFEHYSSADLCMSAFKAPLDPSTVLGGFSGNDYSGASAFVVTYPVNNAVDKEGNGTRKAIAWEKTFIQLVKDELLPMVQSRNLTLAFSSESSVEEELKRESTADAITILVSYLVMFAYISLTLGDTLHPSFFYISSKVLLGLSGVILVMLSVLGSVGFFSVLGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQRLELPLDERISNALVEVGPSITLASVSEVLAFAVGSFISMPAIRVFSMFAALAVLLDFLLQVTAFVALIVLDSLRAEDKRVDCFPCIKVHSDPDIGIGQRKPGLLARYMKEVHAPILSIWGVKIVVIAVFVGFTFASIALSTRVEPGLEQEIVLPRDSYLQGYFSNVSEYLRIGPPLYFVVKNYNYSSESPQTNQLCSISRCNSDSLLNEIAKVALVPDTSYIAKPAASWLDDFLVWVSPEAFGCCRKFTNGSYCPPDDQPPCCAPGDNSCVSVGTCKDCTTCFRHSDLQNDRPSTTQFREKLPWFLSSLPSADCAKGGHGAYTSSVELTGYNNSIIPASSFRTYHTPLNKQIDYVNSMRAAREFSSRVSESLKIEIFPYSVFYMFFEQYLHIWKTALVNLAIAIGAVFIVCLVITGSLWSSSIILLVLAMVVVDLMGVMTILNIQLNALSVVNLVMSVGIAVEFCVHMTHSFTVASGDRDQRAKEALSTMGASVFSGITLTKLVGVIVLCFSRTEVFVIYYFRMYLSLVLLGFLHGLVFLPVVLSIFGPPSRCSITEQGEIRSSTSSRQ